Tomihiko Higuchi, Shin-ichi Ito, Toyoho Ishimura, Yasuhiro Kamimura, Kotaro Shirai, Hana Shindo, Kozue Nishida, Kosei Komatsu. 2019. Otolith oxygen isotope analysis and temperature history in early life stages of the chub mackerel Scomber japonicus in the Kuroshio–Oyashio transition region.Deep Sea Research Part II: Topical Studies in Oceanography   2019年10月


Dung Quang Le, Siau Yin Fui, Rumeaida Mat Piah, Toyoho Ishimura, Yuji Sano, Kentaro Tanaka, Kotaro Shirai. Isotopic evidence of connectivity between an inshore vegetated lagoon (nursery habitat) and coastal artificial reefs (adult habitats) for the reef fish Lethrinus lentjan on the Terengganu coast, Malaysia. Marine and Freshwater Research  2019年5月


Ujiie, U., Kimoto, K., Ishimura, T. Advanced approach to analyzing calcareous protists for present and past pelagic ecology: comprehensive analysis of 3D-morphology, stable isotopes, and genes of planktic foraminifers. PLoS ONE  2019年3月


Ota, Y., Kuroda, J., Yamaguchi, A., Suzuki, A., Araoka, D., Ishimura, T., NGHP Expedition 02 JAMSTEC Science Team, and Kawahata, H. Monsoon-influenced variations in plankton community structure and upper-water column stratification in the western Bay of Bengal during the past. Palaeogeography, Palaeoclimatology, Palaeoecology 521 138-150 2019年2月


Sakamoto, T., Komatsu, K., Shirai, K., Higuchi, T., Ishimura, T., Setou, T., Kamimura, Y., Watanabe, C., and Kawabata, A. 2018. Combining micro-volume isotope analysis and numerical simulation to reproduce fish migration history. Methods in Ecology and Evolution. (accepted) DOI: 10.1111/2041-210X.13098


Nishida, K., Hayashi, M., Yamamoto, Y., Irie, T., Watanabe, Y., Kishida, C., Nojiri, Y., Sato, M.,  Ishimura, T., Suzuki, A. 2018. Effects of elevated CO2 on shell 13C and 18O content and growth rates in the clam Scapharca broughtonii. Geochimica et Cosmochimica Acta, 235, 15, 246-261. DOI: 10.1016/j.gca.2018.05.030


伊藤進一・船本鉄一郎・志田修・上村泰洋・高橋素光・白井厚太朗・樋口富彦・小松幸生・横井孝暁・坂本達也・Guo Chen-ying・石村豊穂.2018.  気候変動が水産資源の変動に与える影響を理解する上での問題点と今後の展望. 海の研究 2(71),59-73


Ino, K., Hernsdorf, A. W., Konno, U., Kouduka, M., Yanagawa, K., Kato, S., Sunamura, M., Hirota, A., Togo, Y. S., Ito, K., Fukuda, A., Iwatsuki, T., Mizuno, T., Komatsu, D. D., Tsunogai, U., Ishimura, T., Amano, Y., Thomas, B. C., Banfield, J. F., and Suzuki, Y. 2017. Ecological and genomic profiling of anaerobic methane-oxidizing archaea in a deep granitic environment. ISME Journal. 9/8 online


Nishida, K. and Ishimura, T. 2017. Grain-scale stable carbon and oxygen isotopic variations of the international reference calcite, IAEA-603. Rapid Communications in Mass Spectrometry. 8/22 accepted online


Sakamoto, T., Komatsu, K., Yoneda, M., Ishimura, T., Higuchi, T., Shirai, K., ... & Kawabata, A. (2017). Temperature dependence of δ 18 O in otolith of juvenile Japanese sardine: Laboratory rearing experiment with micro-scale analysis. Fisheries Research, 194, 55-59. DOI:10.1016/j.fishres.2017.05.004




Nobuhara, T., Onda, D., Sato, T., Aosawa, H., Ishimura, T., Ijiri, A., Tsunogai, U., Kikuchi, N., Kondo, Y., Kiel, S. 2016.Mass occurrence of the enigmatic gastropod Elmira in the Late Cretaceous Sada Limestone seep deposit in southwestern Shikoku, Japan. PalZ. doi:10.1007/s12542-016-0326-4


Aleksey, S., Darling, K. F., Ishimura, T., Wade, C. M., Kimoto, K., Singh, A. D., Anand, P., Kroon, D., Jung, S., Ganssen, G., Ganeshram, R., Tsunogai, U., Elderfield, H. 2016. Geochemical imprints of genotypic variants of Globigerina bulloides in the Arabian Sea. Paleoceanography, 31, doi:10.1002/2016PA002947.


Suzuki, Y., Mukai, H., Ishimura, T., Yokoyama, T.D., Sakata, S., Hirata, T., Iwatsuki, T., Mizuno, T.. 2016. Formation and Geological Sequestration of Uranium Nanoparticles in Deep Granitic Aquifer. Scientific Repprts. 6, 22701; doi: 10.1038/srep22701 (2016).


尾田昌紀, 鐵智美,坂井三郎,石村豊穂.2016.耳石の安定同位体比分析を用いたマイワシ回遊履歴の判別法.水産海洋研究. 80(1), 48-55.


Takagi, H., Moriya, K., Ishimura, T., Suzuki, A., Kawahata, H., and Hirano, H., 2015. Individual migration pathways of modern planktic foraminifers: Chamber-by-chamber assessment of stable isotopes. Paleontological Research, doi:10.2517/2015PR036.


Yoshimura, T., Izumida, H., Nakashima, R., Ishimura, T., Shikazono, N., Kawahata, H., Suzuki, A. 2015. Stable carbon isotope values in dissolved inorganic carbon of ambient waters and shell carbonate of the freshwater pearl mussel (Hyriopsis sp.). Journal of Paleolimnology. DOI: 10.1007/s10933-015-9834-6


Takagi, H., Moriya, K., Ishimura, T., Suzuki, A., Kawahata, H., Hirano, H. 2015. Exploring photosymbiotic ecology of planktic foraminifers from chamber-by-chamber isotopic history of individual foraminifers. Paleobiology. 41. 1. 108-121. doi:10.1017/ pab.2014.7


Nishida, K., Ishikawa, K., Iguchi, A., Tanaka, Y., Sato, M., Ishimura, T., Inoue, M., Nakamura, T., Sakai, K., Suzuki, A. (2014). Skeletal oxygen and carbon isotope compositions of Acropora coral primary polyps experimentally cultured at different temperatures. Geochemistry, Geophysics, Geosystems, 15(7), 2840-2849. DOI: 10.1002/2014GC005322


Nishida, K., Iguchi, A., Ishimura, T., Sakai, K., Suzuki, A. 2014. Skeletal isotopic responses of the Scleractinian coral Isopora palifera to experimentally controlled water temperatures. Geochemical Journal. doi:10.2343/geochemj.2.0317 (2014.6.)


西田 梢・鈴木 淳・石村豊穂・佐藤圭・佐々木猛智.2014. 二枚貝の貝殻微細構造形成への水温の影響.月刊地球.36. 1. 29-34  (2014.1.1)


Kitagawa, T., Ishimura, T., Uozato, R., Shirai, K., Amano, H., Shinoda, A., Tsunogai, U., and Kimura, S. 2013. Validity of otolith δ18O of Pacific bluefin tuna (Thunnus orientalis) as an indicator for ambient environment. Marine Ecology Progress Series. 481. 199–209. doi: 10.3354/meps10202


Hayashi, E., Suzuki. A., Nakamura, T., Iwase, A., Ishimura, T., Iguchi, A., Sakai, S., Okai, T., Inoue, M., Araoka, A., Murayama, S., and Kawahata, H. 2012. Growth-rate influences on coral climate proxies tested by a multiple colony culture experiment. Earth and Planetary Science Letters. 362. 198-206. doi: 10.1016/j.epsl.2012.11.046.


Ishimura, T., Tsunogai, U., Hasegawa, S., Nakagawa, F., Oi, T., Kitazato, H., Suga, H., Toyofuku, T. 2012. Variation in stable carbon and oxygen isotopes of individual benthic foraminifera: tracers for quantifying the magnitude of isotopic disequilibrium. Biogeosciences. 9, 4353-4367, doi:10.5194/bg-9-4353-2012


Nishida, K., Ishimura, T., Suzuki, A., and Sasaki, T. Seasonal changes in the shell microstructure of the bloody clam. 2012. Scapharca broughtonii (Mollusca: Bivalvia: Arcidae). Palaeogeography, Palaeoclimatology, Palaeoecology. http://dx.doi.org/10.1016/j.palaeo.2012.08.017 (accepted, in press)


Ishimura, T., Tsunogai, U., Hasegawa, S., Nakagawa, F., Oi, T., Kitazato, H., Suga, H., and Toyofuku, T. 2012. Variation in stable carbon and oxygen isotopes of individual benthic foraminifera: tracers for quantifying the vital effect, Biogeosciences Discuss., 9, 6191-6218, doi:10.5194/bgd-9-6191-2012


Komatsu,D.D., Tsunogai, U., Kamimura, K., Nakagawa, F., Konno, U., Ishimura, T. 2011. Stable hydrogen isotopic analysis of nano-molar molecular hydrogen using automatic multi-step gas chromatograph. Rapid Communications in Mass Spectrometry. 25, 3351–3359. doi: 10.1002/rcm.5231


Izumida, H., Yoshimura, T., Suzuki, A., Nakashima, R., Ishimura, T., Yasuhara, M., Inamura, A., Shikazono, N., Kawahata, H.. 2011. Biological and water chemistry controls on Sr/Ca, Ba/Ca, Mg/Ca and d18O profiles in freshwater pearl mussel Hyriopsis sp.. Palaeogeography, Palaeoclimatology, Palaeoecology. 309, 298–308. DOI: 10.1016/j.palaeo.2011.06.014


Mishima, M., Suzuki, A., Nagao, M., Ishimura, T., Inoue, M., Kawahata H. 2010, Abrupt shift toward cooler condition in the earliest 20th century detected in a 165 year coral record from Ishigaki Island, southwestern Japan, Geophysical Research Letters, doi:10.1029/2010GL043451.


Fukuda, A., Hagiwara, H., Ishimura, T., Kouduka, M., Amano, Y., Tsunogai, U., Suzuki, Y., Mizuno, T. 2010. Geomicrobiological Properties of Ultra-Deep Granitic Groundwater from the Mizunami Underground Research Laboratory (MIU), Central Japan. Microbial Ecology. DOI: 10.1007/s00248-010-9683-9


Kimoto, K., Ishimura, T., Tsunogai, U., Itaki, T., Ujii´e, Y.. 2009. The living triserial planktic foraminifer Gallitellia vivans (Cushman): Distribution, stable isotopes, and paleoecological implications, Marine Micropaleontology, doi: 10.1016/j.marmicro.2009.01.006


Ishimura, T. Tsunogai, U., Nakagawa, F. 2008. Grain-scale heterogeneity of the stable carbon and oxygen isotopic compositions in international standard calcite materials (NBS19, NBS18, IAEA-CO-1, and IAEA-CO-8). Rapid Communications in Mass Spectrometry. 22, 1925–1932. DOI: 10.1002/rcm.3571


Komatsu, D., Ishimuta, T., Nakagawa, F., Tsunogai, U. 2008. Determination of the 15N/14N, 17O/16O, and 18O/16O ratios of nitrous oxide by using continuous-flow isotope ratio mass spectrometry. Rapid Communications in Mass Spectrometry. 22, 1587–1596. DOI: 10.1002/rcm.3493


Uchida, M., Ohkushi, K., Kimoto, K., Inagaki, F., Ishimura, T., Tsunogai, U., TsuZino, T., and Shibata, Y.. 2008. Radiocarbon-based carbon source quantification of anomalous isotopic foraminifera in last glacial sediments in the western North Pacific, Geochem. Geophys. Geosyst., 9, Q04N14, DOI: 10.1029/2006GC001558


石村豊穂・井尻 暁・阿部恒平・角皆 潤. 2005. 北海道中新統望来層におけるシロウリガイ属化石をともなう石灰質団塊の特徴. 地質学雑誌111. pp VII-VIII.


Ishimura, T., Tsunogai, U., and Gamo, T., Stable carbon and oxygen isotopic determination of sub-microgram quantities of CaCO3 to analyze individual foraminiferal shells. Rapid Communications in Mass Spectrometry. 18. pp 2883-2888. DOI: 10.1002/rcm.1701. 2004.


能條 歩・板木拓也・石村豊穂. 2003. 北海道における新生界の微化石研究—1990年以降の研究成果の総括と今後の課題ー,地球科学57, pp 343-355.


Ishimura, T., Dick M.H., Takashima, R., Hirose, M., Gautam, P., H. Nishi, H. and Tsunogai, U. 2008. Experimental study of the stable isotopic compositions of calcareous microfossils in shallow marine sediments for reconstructing paleoenvironment, and a comparison with the MART index. In: H. Okada, S.F. Mawatari, N. Suzuki and P. Gautam (eds.), Origin and Evolution of Natural Diversity, Proc. Int. Symp. "The Origin and Evolution of Natural Diversity", pp. 109-114. ISBN 978-4-9903990-0-9


Dick, M.H., Hirose, M., Takashima, R., Ishimura, T., Nishi, H. Mawatari, S.F., 2008. Application of MART analysis to infer paleoseasonality in a Pleistocene shallow marine benthic environment. In: H. Okada, S.F. Mawatari, N. Suzuki and P. Gautam (eds.), Origin and Evolution of Natural Diversity, Proc. Int. Symp. "The Origin and Evolution of Natural Diversity", pp. 93-99. 2008. ISBN 978-4-9903990-0-9


Ishimura, T., Tsunogai, U., Hasegawa, S., Nakagawa, F. 2006. Ecological studies of benthic foraminifera based on the stable isotopic dispersions of individual tests. Carvalho, I. ed. Anuário do Instituto de Geociéncias – UFRJ. ISSN 0101-9759 29. 1. p. 593-594.2006


Hasegawa, S., Abe, K., Ishimura, T., and Uchida, J. 2006. Primary type specimens of some domestic species in Japan, and their taxonomic status. Carvalho, I. ed. Anuário do Instituto de Geociéncias – UFRJ. ISSN 0101-9759 29. 1. p. 333-334.


Kuramoto, S., Ashi, J., Gruinert, J., Gulick, S., Ishimura, T., Morita, S., Nakamura, K., Okada, M., Okamoto, T., Rickert, D., Saito, S., Suess, E., Tsunogai, U., and Tomosugi, T.. Surface Obserbations of Subduction Related Mud Volcanoes and Large Thrust Sheets in the Nankai Subduction Margine ; Report on YK00-10 and YK 01-04 Cruises, JAMSTEC J.Deep See Res., 19, pp 131-139. 2001.


芦寿一郎・倉本真一・森田澄人・角皆潤・後藤秀作・小島茂明・岡本拓士・石村豊穂・井尻暁・土岐知弘・工藤新吾・浅井聡子・内海真央. 熊野沖南海トラフ付加プリズムの地質構造と冷湧水YK01-04 Leg2熊野沖調査概要, JAMSTEC深海研究20, pp 1-8. 2002.



石村豊穂2010. 小型汎用ガス精製システムの開発. GSJ Newsletter. No.66. P4


石村豊穂・角皆 潤.2009. 高感度安定同位体組成定量法を用いた生物源炭酸塩の微小領域における安定同位体比分散の解明とその応用.月刊地球30. 11. 604-609 


渡邊 剛・岨 康輝・白井厚太朗・石村豊穂・坂井三郎・横山一己・角皆 潤・佐野有司. 2008. シャコガイ殻の同位体比、微量元素分析 ーシャコガイ殻は日単位の環境変動を記録しているのかー.月刊地球30. 7. 316-321 

日本古生物学会編・古生物学事典第二版.2010. (編集協力). 朝倉書店.





石村豊穂・北川貴士・木村伸吾・鈴木 淳.マグロ類耳石中の酸素安定同位体の環境履歴指標としての有効性の検討.東京大学大気海洋研究所平成23年度学際連携研究報告書.2p. 2012


石村豊穂. 石灰質微化石の超微小領域安定同位体比研究:新しい環境変動シグナルの検出を目指して.平成2123年度文部省科学研究費補助金(若手研究B)研究成果報告書,5p. 2012 


石村豊穂・板木拓也・嶋田智恵子・長谷川四郎. 北海道東部白糠丘陵南西縁浦幌地域における中新世微化石層序と堆積環境変遷.長谷川四郎編,平成1112年度文部省科学研究費補助金(基盤研究(C)(2)「北日本における中期中新世寒冷化過程の微化石に基づく高分解能解析」研究成果報告書,pp29-40. 2001


石村豊穂・板木拓也・長谷川四郎. 北海道東部白糠丘陵東縁阿寒地域における中新世微化石層序と堆積環境変遷.長谷川四郎編,平成1112年度文部省科学研究費補助金(基盤研究(C)(2)「北日本における中期中新世寒冷化過程の微化石に基づく高分解能解析」研究成果報告書,pp41-49. 2001. 


YK00-10 Cruise (Leg-1) Onboard Report, Nankai Subduction MarginSHINKAI6500/YOKOSUKA. JAMSTEC. 2000.担当core-description, foraminiferal analysis and chemical analysis


YK01-04 Cruise (Leg-2) CRUISE REPORT〜 駿河湾・南海トラフ. 海洋科学技術センター. 2001.担当:堆積物コア記載および有孔虫分析) 


YK02-02 Cruise (Leg-2,3) CRUISE REPORT, Nankai Subduction Margin. JAMSTEC.2002.担当core-description, foraminiferal analysis





Ecological and geochemical characterizations of foraminifera in submarine methane seepage area. (海底メタン湧出域における有孔虫の生態学的および地球化学的特性の解明) 北海道大学大学院理学研究科博士論文 2005. (主査:角皆潤,副査:岡田尚武・鈴木徳行・長谷川四郎・蒲生俊敬)


北海道東部白糠丘陵縁辺地域における中新世微化石層序と堆積環境変遷 (Miocene biostratigraphy and sedimentary environmental changes in Shiranuka area, eastern Hokkaido) 北海道大学大学院地球環境科学研究科修士論文 1999. (指導教官:長谷川四郎,大場忠道)


北海道東部白糠地域における中新統の堆積環境.北海道大学理学部卒業論文 1997. (指導教官:長谷川四郎)